SOM cluster: 1104

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 439
Promoter: 7%
CpG-Island: 6%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 66/100 | e-val: 2.2e-30
Factore-val(match)DB
TFAP2A0.0000014169JASPAR
SP10.000026923JASPAR
INSM10.000051268JASPAR
EBF10.00038502JASPAR
Klf40.00040063JASPAR
Sites: 68/100 | e-val: 3.7e-16
Factore-val(match)DB
TFAP2A0.000020126JASPAR
SP10.0023659JASPAR
ESR10.0039106JASPAR
Pax40.0045581JASPAR
RREB10.0049132JASPAR
Sites: 29/100 | e-val: 0.0033
Factore-val(match)DB
Stat30.00011191JASPAR
FEV0.0010937JASPAR
SPI10.0025825JASPAR
Myf0.0029448JASPAR
TLX1::NFIC0.011561JASPAR
Sites: 32/100 | e-val: 0.29
Factore-val(match)DB
Tal1::Gata10.0000034898JASPAR
MZF1_1-40.0077529JASPAR
PPARG::RXRA0.0097865JASPAR
CTCF0.014474JASPAR
SPIB0.015474JASPAR

BED file downloads

Download top of 439 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 71952565-71952715INPPL137.82
chr13: 103052240-103052390FGF14-IT149.96
chr1: 161088980-161089130USP2151.47
chr1: 161088980-161089130DEDD51.47
chr1: 161088980-161089130PFDN251.47
chr11: 68531820-68531970GAL54.15
chr5: 179599520-179599670RASGEF1C55.2
chr4: 134072660-134072810PCDH1055.34
chr4: 134072660-134072810RP11-9G1.355.34
chr22: 50962745-50962895NCAPH256
View top connections.

Other

CodePlot