SOM cluster: 827

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 967
Promoter: 15%
CpG-Island: 4%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.000000017
Factore-val(match)DB
Pax40.000000000042049JASPAR
SP10.0000033321JASPAR
RREB10.000032893JASPAR
Klf40.0039918JASPAR
MZF1_1-40.00721JASPAR
Sites: 19/100 | e-val: 0.053
Factore-val(match)DB
Myf0.0000019192JASPAR
Spz10.0050111JASPAR
Tal1::Gata10.0071456JASPAR
NHLH10.011359JASPAR
SP10.026265JASPAR

BED file downloads

Download top of 967 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150848245-150848395CTSK12.99
chr1: 150848245-150848395RP11-316M1.1212.99
chr1: 150480145-150480295TARS222.59
chr12: 50303925-50304075BCDIN3D-AS144.33
chr17: 74812505-74812655MGAT5B48.2
chr17: 74812505-74812655METTL2348.2
chr12: 49668220-49668370TROAP49.17
chr12: 49668220-49668370TUBA1C49.17
chr12: 49668220-49668370RP11-161H23.549.17
chr9: 138453380-138453530PAEP50.17
View top connections.

Other

CodePlot