SOM cluster: 570

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 7128
Promoter: 3%
CpG-Island: 6%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 74/100 | e-val: 3.5e-35
Factore-val(match)DB
RREB10.0000000000065988JASPAR
SP10.000000016328JASPAR
Pax40.00000001826JASPAR
Tal1::Gata10.00030628JASPAR
Klf40.00067655JASPAR
Sites: 24/100 | e-val: 0.001
Factore-val(match)DB
SP10.0000020578JASPAR
PLAG10.0000034118JASPAR
Pax40.0001479JASPAR
PPARG::RXRA0.0059873JASPAR
MZF1_1-40.0070755JASPAR
Sites: 32/100 | e-val: 0.0033
Factore-val(match)DB
SP10.00055124JASPAR
Myf0.0010822JASPAR
Pax40.0021975JASPAR
ZNF354C0.0026357JASPAR
ZEB10.0046454JASPAR

BED file downloads

Download top of 7128 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 147791005-147791155RP11-495P10.514.07
chr1: 150531245-150531395LINC0056816.97
chr12: 117475565-117475715TESC25.22
chr1: 147144960-147145110RP11-533N14.326.65
chr11: 64503300-64503450MEN129.24
chr19: 10735345-10735495ATG4D37.25
chr19: 33863040-33863190PEPD37.45
chr9: 139312880-139313030GPSM137.87
chr1: 46650345-46650495LURAP140.69
chr9: 116110865-116111015CDC2641.91
View top connections.

Other

CodePlot