SOM cluster: 475

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 117
Promoter: 7%
CpG-Island: 0%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 2.3e-30
Factore-val(match)DB
SPI10.000000009836JASPAR
SPIB0.00000049993JASPAR
FEV0.000010465JASPAR
ELF50.000070205JASPAR
ELK40.00031066JASPAR

BED file downloads

Download top of 117 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 134287740-134287890AKR1B1550.42
chr3: 53203460-53203610RFT152.31
chr3: 53203460-53203610PRKCD52.31
chr17: 9967240-9967390GAS759.31
chr17: 47819820-47819970RP11-613C6.270.97
chr17: 47819820-47819970SPOP70.97
chr22: 17255640-17255790TPTEP174.03
chr18: 77742860-77743010PQLC177.02
chr2: 68968500-68968650ARHGAP2578.64
chr4: 84479980-84480130AGPAT980.87
View top connections.

Other

CodePlot