SOM cluster: 2327

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4681
Promoter: 0%
CpG-Island: 9%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 73/100 | e-val: 5.3e-39
Factore-val(match)DB
SP10.0000060227JASPAR
PLAG10.00054289JASPAR
TFAP2A0.0013488JASPAR
Klf40.0015866JASPAR
REST0.004768JASPAR
Sites: 89/100 | e-val: 0.0000000000045
Factore-val(match)DB
ESR10.0028729JASPAR
SP10.0037016JASPAR
INSM10.024642JASPAR
Klf40.027963JASPAR
Egr10.030046JASPAR

BED file downloads

Download top of 4681 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 180911605-180911755KIAA161422.93
chr1: 202680405-202680555SLC25A39P129.13
chr10: 81897705-81897855TMEM254-AS136.36
chr22: 19796345-19796495TXNRD238.75
chr1: 161059565-161059715USF138.79
chr1: 204117905-204118055KISS140.95
chr19: 38782485-38782635SIPA1L341
chr17: 17745880-17746030SREBF144.46
chr1: 203014540-203014690RP11-335O13.745.63
chr9: 138442485-138442635RP11-98L5.445.7
View top connections.

Other

CodePlot