SOM cluster: 1812
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 970Promoter: 0%
CpG-Island: 0%
Conserved: 41%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 56/100 | e-val: 1.7e-34 | ||
---|---|---|
Factor | e-val(match) | DB |
SOX10 | 0.0000068543 | JASPAR |
Foxd3 | 0.00031004 | JASPAR |
SRY | 0.0032816 | JASPAR |
SOX9 | 0.0065511 | JASPAR |
Sox2 | 0.0066315 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr18: 55954940-55955090 | NEDD4L | 46.2 |
chr16: 524660-524810 | RAB11FIP3 | 46.28 |
chr16: 524660-524810 | TMEM8A | 46.28 |
chr16: 524660-524810 | PIGQ | 46.28 |
chr12: 102009765-102009915 | CHPT1 | 48.8 |
chr1: 161283465-161283615 | APOA2 | 49.88 |
chr1: 161283465-161283615 | MPZ | 49.88 |
chr1: 161283465-161283615 | SDHC | 49.88 |
chr3: 133436360-133436510 | RP11-404G16.2 | 52.84 |
chr3: 133436360-133436510 | TF | 52.84 |