SOM cluster: 1696

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3956
Promoter: 1%
CpG-Island: 0%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 31/100 | e-val: 1.2e-16
Factore-val(match)DB
Pou5f10.000056298JASPAR
Foxd30.00047563JASPAR
Sox20.0009193JASPAR
Lhx30.004258JASPAR
NFATC20.0074524JASPAR

BED file downloads

Download top of 3956 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150130880-150131030PLEKHO113.06
chr17: 12414040-12414190LINC0067032.8
chr8: 120095640-120095790COLEC1035.98
chr8: 119964705-119964855TNFRSF11B37.24
chr12: 109116300-109116450CORO1C38.6
chr12: 109116300-109116450SSH138.6
chr15: 101403640-101403790LRRK140.43
chr8: 8175325-8175475FAM86B3P41.37
chr3: 9441080-9441230SETD5-AS141.78
chr2: 109278540-109278690LIMS142
View top connections.

Other

CodePlot