Gene: PTPRF
chr1: 43990857-44019190Expression Profile
(log scale)
Graphical Connections
Distribution of linked clusters:
You may find it interesting if many of the connected DHS sites belong to the same cluster.| Cluster Profile | Cluster ID | Number of DHS sites in this cluster |
|---|---|---|
 | 2197 | 3 |
 | 979 | 2 |
 | 1627 | 1 |
 | 1705 | 1 |
 | 806 | 1 |
 | 2150 | 1 |
 | 15 | 1 |
 | 1314 | 1 |
 | 1509 | 1 |
 | 509 | 1 |
 | 825 | 1 |
 | 381 | 1 |
 | 2487 | 1 |
 | 66 | 1 |
 | 1010 | 1 |
 | 1008 | 1 |
 | 1043 | 1 |
 | 978 | 1 |
 | 440 | 1 |
 | 1475 | 1 |
 | 935 | 1 |
 | 57 | 1 |
 | 846 | 1 |
 | 2037 | 1 |
 | 1144 | 1 |
 | 1115 | 1 |
 | 1872 | 1 |
 | 2492 | 1 |
 | 2241 | 1 |
 | 390 | 1 |
 | 795 | 1 |
 | 2228 | 1 |
 | 1358 | 1 |
 | 687 | 1 |
 | 416 | 1 |
 | 747 | 1 |
 | 402 | 1 |
Resources
BED file downloads
Connects to 40 DHS sitesTop 10 Correlated DHS Sites
p-values indiciate significant higher or lower correlation| Location | Cluster | P-value |
|---|---|---|
| chr1:43941880-43942030 | 795 | 0 |
| chr1:43938140-43938290 | 846 | 0 |
| chr1:44014160-44014310 | 2492 | 0.002 |
| chr1:44011520-44011670 | 440 | 0.006 |
| chr1:43996460-43996610 | 1314 | 0.006 |
| chr1:43988920-43989070 | 747 | 0.007 |
| chr1:43958540-43958690 | 2228 | 0.007 |
| chr1:44014000-44014150 | 1115 | 0.008 |
| chr1:43998905-43999055 | 825 | 0.008 |
| chr1:43938600-43938750 | 1144 | 0.008 |
| chr1:43941420-43941570 | 2241 | 0.01 |
External Databases
UCSCEnsembl (ENSG00000142949)