Gene: CDX1
chr5: 149546357-149564120Expression Profile
(log scale)
Graphical Connections
Distribution of linked clusters:
You may find it interesting if many of the connected DHS sites belong to the same cluster.| Cluster Profile | Cluster ID | Number of DHS sites in this cluster |
|---|---|---|
 | 1132 | 4 |
 | 2037 | 4 |
 | 1375 | 3 |
 | 2052 | 3 |
 | 1523 | 3 |
 | 1758 | 3 |
 | 655 | 3 |
 | 1180 | 2 |
 | 2293 | 2 |
 | 1750 | 2 |
 | 1796 | 2 |
 | 1000 | 2 |
 | 1002 | 2 |
 | 1474 | 1 |
 | 957 | 1 |
 | 1150 | 1 |
 | 10 | 1 |
 | 1244 | 1 |
 | 311 | 1 |
 | 1692 | 1 |
 | 1630 | 1 |
 | 1433 | 1 |
 | 1592 | 1 |
 | 1611 | 1 |
 | 1347 | 1 |
 | 1526 | 1 |
 | 927 | 1 |
 | 2156 | 1 |
 | 2104 | 1 |
 | 203 | 1 |
 | 958 | 1 |
 | 1447 | 1 |
 | 1835 | 1 |
 | 2055 | 1 |
 | 1704 | 1 |
 | 1770 | 1 |
 | 1057 | 1 |
 | 2333 | 1 |
 | 104 | 1 |
 | 2453 | 1 |
 | 2351 | 1 |
 | 1528 | 1 |
Resources
BED file downloads
Connects to 64 DHS sitesTop 10 Correlated DHS Sites
p-values indiciate significant higher or lower correlation| Location | Cluster | P-value |
|---|---|---|
| chr5:149593880-149594030 | 1523 | 0 |
| chr5:149594045-149594195 | 1523 | 0 |
| chr5:149511980-149512130 | 2351 | 0.001 |
| chr5:149593220-149593370 | 1447 | 0.001 |
| chr5:149487865-149488015 | 2156 | 0.001 |
| chr5:149594280-149594430 | 1132 | 0.001 |
| chr5:149468400-149468550 | 1750 | 0.002 |
| chr5:149535625-149535775 | 2453 | 0.002 |
| chr5:149537840-149537990 | 1002 | 0.002 |
| chr5:149560280-149560430 | 1375 | 0.002 |
| chr5:149523300-149523450 | 2293 | 0.004 |
External Databases
UCSCEnsembl (ENSG00000113722)