Gene: SNX5
chr20: 17922240-17949623Expression Profile
(log scale)Graphical Connections
Distribution of linked clusters:
You may find it interesting if many of the connected DHS sites belong to the same cluster.Cluster Profile | Cluster ID | Number of DHS sites in this cluster |
---|---|---|
759 | 5 | |
1212 | 5 | |
958 | 5 | |
1150 | 4 | |
1355 | 3 | |
2496 | 2 | |
2212 | 2 | |
2104 | 2 | |
2354 | 2 | |
393 | 1 | |
57 | 1 | |
1056 | 1 | |
881 | 1 | |
1011 | 1 | |
453 | 1 | |
760 | 1 | |
23 | 1 | |
999 | 1 | |
569 | 1 | |
504 | 1 | |
1504 | 1 | |
271 | 1 | |
2211 | 1 | |
1124 | 1 | |
1901 | 1 | |
265 | 1 | |
2107 | 1 | |
1499 | 1 | |
965 | 1 | |
1000 | 1 | |
15 | 1 | |
2168 | 1 | |
1344 | 1 | |
410 | 1 | |
66 | 1 | |
1008 | 1 | |
1592 | 1 | |
1855 | 1 | |
500 | 1 | |
556 | 1 | |
503 | 1 |
Resources
BED file downloads
Connects to 62 DHS sitesTop 10 Correlated DHS Sites
p-values indiciate significant higher or lower correlationLocation | Cluster | P-value |
---|---|---|
chr20:17950060-17950210 | 1124 | 0 |
chr20:17853100-17853250 | 2211 | 0.001 |
chr20:17920025-17920175 | 1056 | 0.001 |
chr20:17946645-17946795 | 1504 | 0.001 |
chr20:17840185-17840435 | 504 | 0.001 |
chr20:17839760-17839910 | 1212 | 0.002 |
chr20:17999900-18000050 | 503 | 0.002 |
chr20:17839925-17840075 | 1212 | 0.002 |
chr20:17837020-17837170 | 23 | 0.002 |
chr20:17920585-17920735 | 1011 | 0.002 |
chr20:17946440-17946590 | 1212 | 0.003 |
External Databases
UCSCEnsembl (ENSG00000089006)