SOM cluster: 992

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 119
Promoter: 3%
CpG-Island: 0%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 3.6e-27
Factore-val(match)DB
AP10.0000007955JASPAR
NFE2L20.0012369JASPAR
HOXA50.032563JASPAR
T0.03605JASPAR
Pax60.075402JASPAR

BED file downloads

Download top of 119 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 127175585-127175735RP11-59J16.134.37
chr3: 149060580-149060730RP11-2G17.136.78
chr3: 149060580-149060730TM4SF1-AS136.78
chr2: 162065120-162065270TANK47.4
chr2: 162065120-162065270AC009299.347.4
chr7: 50905780-50905930GRB1047.54
chr3: 141013860-141014010ZBTB3848.26
chr22: 36794720-36794870MYH949.87
chr22: 36794720-36794870FOXRED249.87
chr6: 117819480-117819630DCBLD162.01
View top connections.

Other

CodePlot