SOM cluster: 985
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 558Promoter: 3%
CpG-Island: 0%
Conserved: 61%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 40/100 | e-val: 0.00000000012 | ||
---|---|---|
Factor | e-val(match) | DB |
FOXI1 | 0.0026551 | JASPAR |
Foxd3 | 0.0037995 | JASPAR |
Evi1 | 0.0055312 | JASPAR |
IRF1 | 0.0066319 | JASPAR |
Lhx3 | 0.0079212 | JASPAR |
Sites: 20/100 | e-val: 0.0014 | ||
Factor | e-val(match) | DB |
SOX9 | 0.00015991 | JASPAR |
NFATC2 | 0.0010473 | JASPAR |
MEF2A | 0.0019471 | JASPAR |
Sox2 | 0.0041627 | JASPAR |
NR3C1 | 0.0041666 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr1: 145478080-145478230 | RBM8A | 13.56 |
chr1: 145478080-145478230 | GNRHR2 | 13.56 |
chr1: 145478080-145478230 | TXNIP | 13.56 |
chr10: 17252440-17252590 | CUBN | 33.85 |
chr10: 17252440-17252590 | VIM-AS1 | 33.85 |
chr10: 17252440-17252590 | RP11-124N14.3 | 33.85 |
chr10: 17252440-17252590 | VIM | 33.85 |
chr4: 90418200-90418350 | RP11-115D19.1 | 42.74 |
chr17: 15372825-15372975 | TVP23C | 45.46 |
chr17: 15372825-15372975 | RN7SL792P | 45.46 |