SOM cluster: 93

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 206
Promoter: 66%
CpG-Island: 91%
Conserved: 86%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
SP10.000000011266JASPAR
TFAP2A0.000040609JASPAR
Klf40.00013127JASPAR
Egr10.0007705JASPAR
Zfx0.018099JASPAR
Sites: 88/100 | e-val: 0
Factore-val(match)DB
SP10.0000069223JASPAR
PLAG10.0022277JASPAR
CTCF0.00765JASPAR
TFAP2A0.010857JASPAR
RXR::RAR_DR50.063815JASPAR
Sites: 45/100 | e-val: 0.0000000038
Factore-val(match)DB
TFAP2A0.00044443JASPAR
SP10.00074389JASPAR
PLAG10.017196JASPAR
ELK40.079058JASPAR
Egr10.10811JASPAR

BED file downloads

Download top of 206 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr15: 96900180-96900330PGAM1P1233.7
chr12: 77272760-77272910CSRP235.44
chr3: 185542960-185543110TRA2B37.2
chr1: 92351620-92351770TGFBR355.9
chr11: 115375120-115375270RP11-136I14.456.16
chr11: 115375120-115375270CADM156.16
chr19: 12146460-12146610ZNF625-ZNF2061
chr19: 12146460-12146610ZNF84461
chr19: 12146460-12146610ZNF43361
chr13: 50699680-50699830RPL18P1066.18
View top connections.

Other

CodePlot