SOM cluster: 877

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 211
Promoter: 1%
CpG-Island: 0%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 3.4e-20
Factore-val(match)DB
SOX100.00023995JASPAR
Foxa20.00051994JASPAR
SRY0.0011812JASPAR
Foxd30.0017102JASPAR
SOX90.0046849JASPAR

BED file downloads

Download top of 211 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 131428580-131428730ASAP148.42
chr10: 17028800-17028950CUBN54.06
chr3: 171684720-171684870FNDC3B55.69
chr5: 132106660-132106810SEPT856.38
chr5: 132106660-132106810GDF956.38
chr5: 132106660-132106810UQCRQ56.38
chr1: 165869940-165870090RP11-525G13.258.42
chr4: 177704080-177704230VEGFC63.82
chr6: 112555400-112555550RNU6-1226P64.71
chr6: 112555400-112555550LAMA464.71
View top connections.

Other

CodePlot