SOM cluster: 822

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 471
Promoter: 20%
CpG-Island: 37%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 91/100 | e-val: 0
Factore-val(match)DB
SP10.00000010576JASPAR
RREB10.000041863JASPAR
Klf40.00042581JASPAR
Tal1::Gata10.00073487JASPAR
PLAG10.00091051JASPAR
Sites: 56/100 | e-val: 0.00041
Factore-val(match)DB
EBF10.010856JASPAR
TP530.017472JASPAR
TFAP2A0.032042JASPAR
NHLH10.040894JASPAR
Egr10.082102JASPAR

BED file downloads

Download top of 471 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 156645825-156645975NES50.24
chr18: 24765405-24765555CHST952.24
chr19: 2229845-2229995OAZ154.19
chr4: 6200425-6200575JAKMIP155.28
chr12: 96336000-96336150AMDHD155.8
chr12: 96336000-96336150RP11-256L6.355.8
chr9: 124989345-124989495NDUFA856.61
chr3: 37494345-37494495ITGA956.9
chr7: 100822725-100822875TRIM5657.77
chr2: 241829265-241829415C2orf5458.43
View top connections.

Other

CodePlot