SOM cluster: 810

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 290
Promoter: 1%
CpG-Island: 0%
Conserved: 69%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 66/100 | e-val: 0
Factore-val(match)DB
CTCF0.0000000000024389JASPAR
INSM10.0029634JASPAR
TAL1::TCF30.011111JASPAR
MYC::MAX0.050996JASPAR
Myf0.060029JASPAR
Sites: 56/100 | e-val: 0.000000000000017
Factore-val(match)DB
Foxd30.0000044197JASPAR
Foxq10.00002504JASPAR
FOXI10.0034036JASPAR
Lhx30.0037764JASPAR
HNF1A0.0060338JASPAR

BED file downloads

Download top of 290 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 55338880-55339030EGFR36.88
chr7: 55338880-55339030EGFR-AS136.88
chr7: 55338880-55339030RP11-775L16.136.88
chr13: 98797385-98797535FARP139.43
chr7: 134576560-134576710CALD146.12
chr1: 86350400-86350550RNA5SP5150.48
chr7: 38491560-38491710AMPH54.25
chr7: 38491560-38491710TRGV454.25
chr7: 38491560-38491710TRGV354.25
chr7: 38491560-38491710TRGV254.25
View top connections.

Other

CodePlot