SOM cluster: 807

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1771
Promoter: 10%
CpG-Island: 22%
Conserved: 29%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 0
Factore-val(match)DB
SP10.00000012203JASPAR
PLAG10.00017409JASPAR
Egr10.00023854JASPAR
Pax40.00048683JASPAR
RREB10.00073239JASPAR
Sites: 92/100 | e-val: 1.8e-18
Factore-val(match)DB
PLAG10.000045855JASPAR
Zfp4230.00032579JASPAR
TFAP2A0.0014762JASPAR
EBF10.0018923JASPAR
ESR10.011048JASPAR
Sites: 29/100 | e-val: 0.011
Factore-val(match)DB
Myf0.0000018854JASPAR
REST0.0034888JASPAR
RREB10.0066292JASPAR
Klf40.0098699JASPAR
NHLH10.011103JASPAR

BED file downloads

Download top of 1771 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145515605-145515755HFE213.02
chr1: 145515605-145515755GNRHR213.02
chr1: 145515605-145515755PIAS313.02
chr1: 145515605-145515755ITGA1013.02
chr1: 149889105-149889255SV2A15.88
chr1: 150522720-150522870MCL117.67
chr1: 151256065-151256215ZNF68736.07
chr1: 151256065-151256215RP11-126K1.236.07
chr9: 139067160-139067310LHX340.06
chr8: 143540785-143540935BAI146.38
View top connections.

Other

CodePlot