SOM cluster: 804

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 428
Promoter: 0%
CpG-Island: 0%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 0.00000011
Factore-val(match)DB
SPIB0.00015264JASPAR
NFKB10.00028643JASPAR
REL0.00072893JASPAR
RELA0.0014886JASPAR
MZF1_1-40.0032089JASPAR

BED file downloads

Download top of 428 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 89859040-89859190GPR9857.26
chr8: 145898165-145898315ARHGAP3965.71
chr1: 226128965-226129115TMEM63A66.76
chr4: 140488785-140488935MGST277.39
chr12: 5500900-5501050NTF378.4
chr14: 57126260-57126410RP11-1085N6.378.65
chr19: 56040280-56040430SHISA780.09
chr8: 24799140-24799290NEFL82.06
chr8: 24799140-24799290NEFM82.06
chr1: 166129020-166129170FAM78B83.77
View top connections.

Other

CodePlot