SOM cluster: 772

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 514
Promoter: 23%
CpG-Island: 21%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
SP10.000000054004JASPAR
RREB10.000022946JASPAR
INSM10.000068684JASPAR
PLAG10.000152JASPAR
Klf40.00059975JASPAR
Sites: 66/100 | e-val: 3.7e-21
Factore-val(match)DB
SP10.00000022747JASPAR
PLAG10.000069759JASPAR
RREB10.0009978JASPAR
Klf40.0020934JASPAR
Pax40.0035919JASPAR
Sites: 47/100 | e-val: 0.00000032
Factore-val(match)DB
znf1430.0001096JASPAR
SP10.00033099JASPAR
Stat30.0059316JASPAR
EWSR1-FLI10.011453JASPAR
FEV0.013354JASPAR

BED file downloads

Download top of 514 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 1117600-1117750B3GALT644.64
chr3: 128207545-128207695RP11-475N22.447.07
chr3: 128207545-128207695EEFSEC47.07
chr5: 179224165-179224315LTC4S49.11
chrX: 49012845-49012995PRAF253.8
chrX: 49012845-49012995AF196779.1253.8
chr9: 139429500-139429650SEC16A58.2
chr1: 2437705-2437855HES558.68
chr1: 1101660-1101810MIR200A59.53
chr16: 68027840-68027990DDX2861.14
View top connections.

Other

CodePlot