SOM cluster: 770

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2815
Promoter: 5%
CpG-Island: 4%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 1e-37
Factore-val(match)DB
Pax40.0000000076337JASPAR
SP10.00000063718JASPAR
RREB10.00000076169JASPAR
Tal1::Gata10.00011698JASPAR
EWSR1-FLI10.0060892JASPAR
Sites: 38/100 | e-val: 1.9e-16
Factore-val(match)DB
SP10.000000099211JASPAR
RREB10.00064551JASPAR
TFAP2A0.0006928JASPAR
Pax40.00086044JASPAR
PLAG10.0010506JASPAR
Sites: 37/100 | e-val: 0.00015
Factore-val(match)DB
FEV0.00000092341JASPAR
SPI10.000001116JASPAR
Stat30.0000011484JASPAR
ELK40.0000024741JASPAR
SPIB0.0000079612JASPAR
Sites: 36/100 | e-val: 0.001
Factore-val(match)DB
PLAG10.00000000071774JASPAR
INSM10.000003357JASPAR
TFAP2A0.00091478JASPAR
EBF10.0016158JASPAR
TLX1::NFIC0.0044444JASPAR
Sites: 11/100 | e-val: 0.22
Factore-val(match)DB
Pax50.0000019168JASPAR
EWSR1-FLI10.00041023JASPAR
SP10.00059553JASPAR
Klf40.00086343JASPAR
EBF10.0057914JASPAR

BED file downloads

Download top of 2815 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145439360-145439510RP11-315I20.116.66
chr22: 39884580-39884730RP5-1104E15.628.2
chr17: 80172085-80172235snoU1331.85
chr1: 182359005-182359155GLUL32.18
chr1: 182359005-182359155GS1-122H1.232.18
chr3: 128203800-128203950RP11-475N22.436.34
chr1: 198898300-198898450RP11-16L9.136.39
chr1: 1118585-1118735B3GALT636.57
chr9: 125095780-125095930RP11-542K23.741.1
chr1: 70033840-70033990LRRC741.8
View top connections.

Other

CodePlot