SOM cluster: 730

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 534
Promoter: 3%
CpG-Island: 1%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 52/100 | e-val: 0
Factore-val(match)DB
HNF1A0.0000000000027556JASPAR
HNF1B0.00000000010486JASPAR
Lhx30.000053241JASPAR
Prrx20.0013834JASPAR
ARID3A0.0029416JASPAR

BED file downloads

Download top of 534 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 140293420-140293570ADCK245.09
chr11: 13904640-13904790SPON145.29
chr4: 25729505-25729655SLC34A250.93
chr3: 134650380-134650530EPHB152.7
chr4: 187069620-187069770RP11-173M11.253.64
chr4: 187069620-187069770FAM149A53.64
chr4: 187069620-187069770CYP4V253.64
chr8: 55660840-55660990RP11-56A10.157.67
chr10: 27069440-27069590ABI159.5
chr1: 60285580-60285730HOOK161.5
View top connections.

Other

CodePlot