SOM cluster: 703

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 117
Promoter: 3%
CpG-Island: 2%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 63/100 | e-val: 2.7e-27
Factore-val(match)DB
TAL1::TCF30.0000000088962JASPAR
CTCF0.0047311JASPAR
Hand1::Tcfe2a0.0056819JASPAR
YY10.017479JASPAR
MYC::MAX0.021392JASPAR
Sites: 29/100 | e-val: 0.000000000074
Factore-val(match)DB
SP10.00000000035243JASPAR
RREB10.00039144JASPAR
Pax40.00040034JASPAR
INSM10.0010295JASPAR
Klf40.002227JASPAR

BED file downloads

Download top of 117 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr2: 28564420-28564570BRE56.23
chr2: 175653220-175653370CHN165.34
chr3: 193990965-193991115LRRC1578.08
chr12: 125012520-125012670NCOR292.29
chr1: 31329260-31329410RP1-65J11.596.75
chr1: 31329260-31329410LAPTM596.75
chr22: 23379020-23379170GNAZ97.37
chr19: 18703045-18703195TMEM59L100.36
chr1: 99930840-99930990RP11-413P11.1103.64
chr9: 132178620-132178770RP11-65J3.3104.69
View top connections.

Other

CodePlot