SOM cluster: 696

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 153
Promoter: 2%
CpG-Island: 0%
Conserved: 60%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 33/100 | e-val: 0.0000000000047
Factore-val(match)DB
Foxd30.000074076JASPAR
SRY0.001219JASPAR
Pax40.0024658JASPAR
ARID3A0.004826JASPAR
Foxq10.0055638JASPAR
Sites: 29/100 | e-val: 0.037
Factore-val(match)DB
AP10.000000000068823JASPAR
NFE2L20.00000023056JASPAR
PBX10.0058226JASPAR
NFE2L1::MafG0.0082042JASPAR
Pax60.0099796JASPAR

BED file downloads

Download top of 153 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150737380-150737530CTSK20.11
chr1: 150737380-150737530ARNT20.11
chr3: 189735600-189735750LEPREL149.08
chr17: 66379720-66379870WIPI154.83
chr3: 150089545-150089695TSC22D257.1
chr2: 3583845-3583995ADI160.5
chr2: 3583845-3583995RNASEH1-AS160.5
chr2: 3583845-3583995RPS760.5
chr2: 3583845-3583995AC010907.260.5
chr2: 3583845-3583995RNASEH160.5
View top connections.

Other

CodePlot