SOM cluster: 668

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 236
Promoter: 18%
CpG-Island: 16%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 53/100 | e-val: 8.3e-31
Factore-val(match)DB
SP10.000000019424JASPAR
Pax40.00000026445JASPAR
RREB10.000001431JASPAR
Tal1::Gata10.00051424JASPAR
Klf40.00055025JASPAR
Sites: 47/100 | e-val: 0.00000095
Factore-val(match)DB
SP10.00011887JASPAR
Tal1::Gata10.0001597JASPAR
Pax40.002532JASPAR
EWSR1-FLI10.018903JASPAR
SPI10.033417JASPAR

BED file downloads

Download top of 236 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 138398280-138398430PPP1R2632.98
chr7: 150101680-150101830ZNF77543.8
chr7: 150101680-150101830REPIN143.8
chr19: 18393640-18393790RN7SL513P51.11
chr19: 18393640-18393790PDE4C51.11
chr19: 18393640-18393790LSM451.11
chr19: 17006825-17006975F2RL353.97
chr17: 40832620-40832770PLEKHH356.01
chr17: 40832620-40832770CCR1056.01
chr17: 40832620-40832770TUBG156.01
View top connections.

Other

CodePlot