SOM cluster: 660
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 7075Promoter: 1%
CpG-Island: 3%
Conserved: 20%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 55/100 | e-val: 6.6e-26 | ||
---|---|---|
Factor | e-val(match) | DB |
SP1 | 0.00000095603 | JASPAR |
INSM1 | 0.00003312 | JASPAR |
PPARG::RXRA | 0.000073165 | JASPAR |
TLX1::NFIC | 0.0027044 | JASPAR |
HNF4A | 0.0047247 | JASPAR |
Sites: 38/100 | e-val: 0.00000000088 | ||
Factor | e-val(match) | DB |
PLAG1 | 0.00090981 | JASPAR |
INSM1 | 0.0047713 | JASPAR |
Zfp423 | 0.008252 | JASPAR |
REST | 0.023833 | JASPAR |
Egr1 | 0.051277 | JASPAR |
Sites: 50/100 | e-val: 0.00014 | ||
Factor | e-val(match) | DB |
Pax4 | 0.00000010939 | JASPAR |
SP1 | 0.00000077517 | JASPAR |
RREB1 | 0.0000095093 | JASPAR |
PLAG1 | 0.00025833 | JASPAR |
Tal1::Gata1 | 0.00070704 | JASPAR |
Sites: 22/100 | e-val: 0.0016 | ||
Factor | e-val(match) | DB |
Pax4 | 0.0000070772 | JASPAR |
RREB1 | 0.000053614 | JASPAR |
Klf4 | 0.00043297 | JASPAR |
SP1 | 0.0036321 | JASPAR |
Egr1 | 0.0045832 | JASPAR |
Sites: 20/100 | e-val: 0.9 | ||
Factor | e-val(match) | DB |
EBF1 | 0.00001672 | JASPAR |
CTCF | 0.00011624 | JASPAR |
ZEB1 | 0.00023146 | JASPAR |
Zfp423 | 0.00078069 | JASPAR |
TFAP2A | 0.00096695 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr1: 149890305-149890455 | SV2A | 18.21 |
chr1: 145587625-145587775 | RNF115 | 22.88 |
chr1: 145587625-145587775 | POLR3C | 22.88 |
chr22: 21810020-21810170 | RIMBP3C | 26.21 |
chr22: 21810020-21810170 | RN7SKP221 | 26.21 |
chr9: 133914720-133914870 | RP11-544A12.4 | 38.4 |
chr9: 133914720-133914870 | RNU6-881P | 38.4 |
chr4: 8590145-8590295 | RP11-689P11.2 | 38.92 |
chr3: 50459165-50459315 | NPRL2 | 43.95 |
chr3: 38163785-38163935 | OXSR1 | 43.97 |