SOM cluster: 655

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 15140
Promoter: 2%
CpG-Island: 2%
Conserved: 35%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 9.5e-19
Factore-val(match)DB
SP10.00000024303JASPAR
Pax40.0023485JASPAR
RREB10.0062184JASPAR
INSM10.0072263JASPAR
MZF1_1-40.0072506JASPAR
Sites: 29/100 | e-val: 0.012
Factore-val(match)DB
TFAP2A0.00000023375JASPAR
EBF10.000027506JASPAR
SP10.00067552JASPAR
EWSR1-FLI10.00087699JASPAR
PLAG10.0016657JASPAR

BED file downloads

Download top of 15140 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150759725-150759875RP11-235D19.213.02
chr1: 151011445-151011595FAM63A13.55
chr1: 150953485-150953635C1orf5616.28
chr1: 150953485-150953635SETDB116.28
chr1: 150529225-150529375LINC0056821.87
chr1: 150529225-150529375GOLPH3L21.87
chr1: 150325965-150326115snoU1329.45
chr1: 180162380-180162530RP5-1180C10.230.06
chr11: 125151265-125151415RP11-687M24.834.08
chr1: 155047645-155047795DPM336.57
View top connections.

Other

CodePlot