SOM cluster: 634

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 141
Promoter: 3%
CpG-Island: 0%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 34/100 | e-val: 0.000000022
Factore-val(match)DB
AP10.000000041103JASPAR
NFE2L20.0000001171JASPAR
PPARG0.00015176JASPAR
RORA_20.0096074JASPAR
Pax20.029394JASPAR
Sites: 30/100 | e-val: 0.00065
Factore-val(match)DB
FOXF20.0013877JASPAR
Foxd30.0026468JASPAR
FOXO30.0042433JASPAR
IRF20.0053052JASPAR
FEV0.0053641JASPAR

BED file downloads

Download top of 141 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92496540-92496690EPHX43.26
chr21: 37298000-37298150PPP1R2P242.44
chr1: 172876040-172876190RP3-471M13.247.5
chr7: 116162280-116162430CAV253.75
chr3: 173112940-173113090NLGN157.64
chr5: 31922040-31922190PDZD259.16
chr1: 214578120-214578270RP11-176D17.359.19
chr1: 214578120-214578270PTPN1459.19
chr19: 47693520-47693670BBC361.4
chr18: 55487000-55487150ATP8B164.31
View top connections.

Other

CodePlot