SOM cluster: 620

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 493
Promoter: 45%
CpG-Island: 10%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 15/100 | e-val: 0.013
Factore-val(match)DB
Foxd30.00048883JASPAR
znf1430.0011766JASPAR
FOXA10.0036878JASPAR
Stat30.0060505JASPAR
NFATC20.0081593JASPAR

BED file downloads

Download top of 493 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 110252780-110252930KLF436.14
chr10: 30724160-30724310MAP3K852.19
chr9: 133321225-133321375snoU1352.95
chr11: 118789860-118790010RN7SL529P57.58
chr3: 173113125-173113275NLGN159.2
chr1: 159893925-159894075SLAMF960.4
chr2: 25193920-25194070ADCY360.58
chr2: 111875940-111876090ACOXL63.7
chr17: 7787305-7787455CHD364.92
chr17: 38599180-38599330IGFBP465.86
View top connections.

Other

CodePlot