SOM cluster: 62
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 137Promoter: 16%
CpG-Island: 10%
Conserved: 59%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 25/100 | e-val: 0.0000000029 | ||
---|---|---|
Factor | e-val(match) | DB |
Pax4 | 0.00000041082 | JASPAR |
SP1 | 0.000022346 | JASPAR |
EWSR1-FLI1 | 0.00010523 | JASPAR |
RREB1 | 0.0042723 | JASPAR |
Tal1::Gata1 | 0.0068291 | JASPAR |
Sites: 29/100 | e-val: 0.0064 | ||
Factor | e-val(match) | DB |
NFKB1 | 0.00083574 | JASPAR |
NF-kappaB | 0.0011487 | JASPAR |
SP1 | 0.0018438 | JASPAR |
SPI1 | 0.0036836 | JASPAR |
FEV | 0.0037291 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr1: 221342960-221343110 | RP11-453O22.1 | 38.58 |
chr9: 22011020-22011170 | C9orf53 | 42.01 |
chr11: 100590140-100590290 | ARHGAP42 | 45.65 |
chr12: 89845640-89845790 | DUSP6 | 46.01 |
chr1: 67217960-67218110 | SGIP1 | 46.58 |
chr1: 67217960-67218110 | TCTEX1D1 | 46.58 |
chr8: 8241945-8242095 | SGK223 | 50.63 |
chrX: 50557065-50557215 | BMP15 | 53.84 |
chr16: 82660980-82661130 | CDH13 | 54.81 |
chr2: 62638720-62638870 | AC093159.1 | 59.44 |