SOM cluster: 607

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 692
Promoter: 1%
CpG-Island: 0%
Conserved: 32%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 30/100 | e-val: 0.0000001
Factore-val(match)DB
Lhx30.0034928JASPAR
Prrx20.0068499JASPAR
Evi10.030839JASPAR
FEV0.032843JASPAR
HNF1A0.043392JASPAR
Sites: 17/100 | e-val: 2.5
Factore-val(match)DB
ARID3A0.0004392JASPAR
Lhx30.00087151JASPAR
FOXA10.0026697JASPAR
Prrx20.0027115JASPAR
HNF1B0.0035037JASPAR

BED file downloads

Download top of 692 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145571520-145571670RP11-315I20.338.13
chr1: 145571520-145571670ITGA1038.13
chr9: 133658320-133658470ABL140.12
chrX: 128873660-128873810XPNPEP240.55
chr10: 120558040-120558190CACUL142.01
chr1: 26161500-26161650MAN1C150.7
chr8: 49439620-49439770AC026904.155.13
chr11: 103249740-103249890DYNC2H158.76
chr1: 78938020-78938170PTGFR59.64
chr13: 103629940-103630090SLC10A259.75
View top connections.

Other

CodePlot