SOM cluster: 60

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 475
Promoter: 4%
CpG-Island: 0%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.0000025
Factore-val(match)DB
TEAD10.00000000028547JASPAR
NFATC20.0001925JASPAR
RELA0.00046089JASPAR
NF-kappaB0.0010711JASPAR
TP530.0029866JASPAR
Sites: 15/100 | e-val: 1.2
Factore-val(match)DB
IRF10.0018252JASPAR
SOX100.0032834JASPAR
EWSR1-FLI10.020135JASPAR
SPIB0.029071JASPAR
Foxd30.030811JASPAR

BED file downloads

Download top of 475 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 204072520-204072670SOX1348.18
chrX: 102895520-102895670MORF4L248.34
chr12: 96370460-96370610RP11-256L6.252.37
chr1: 44636140-44636290RP5-1198O20.461.78
chr1: 157987740-157987890KIRREL-IT161.95
chr3: 120194920-120195070FSTL163.65
chr18: 25645080-25645230CDH268.18
chr4: 62066965-62067115LPHN371.35
chr4: 77380060-77380210SHROOM371.57
chr1: 214398040-214398190SMYD271.78
View top connections.

Other

CodePlot