SOM cluster: 588

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 159
Promoter: 1%
CpG-Island: 0%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 0.0000000000015
Factore-val(match)DB
Foxd30.000028498JASPAR
Pax40.000086481JASPAR
Foxq10.0054225JASPAR
FOXI10.0080338JASPAR
SRY0.033468JASPAR
Sites: 25/100 | e-val: 0.0058
Factore-val(match)DB
TAL1::TCF30.00000026683JASPAR
Myf0.00018524JASPAR
NHLH10.0014388JASPAR
Spz10.0022347JASPAR
FOXO30.0040734JASPAR

BED file downloads

Download top of 159 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 15769460-15769610TMEM2748.37
chrX: 15769460-15769610CA5B48.37
chr11: 114179440-114179590NNMT52.51
chr8: 39939220-39939370C8orf452.7
chr6: 114245540-114245690MARCKS59.69
chr6: 114245540-114245690RP11-544L8__B.459.69
chr6: 114245540-114245690HDAC259.69
chr8: 56829120-56829270TGS162.51
chr1: 211784520-211784670NEK264.95
chr1: 211784520-211784670RP11-122M14.164.95
View top connections.

Other

CodePlot