SOM cluster: 587

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 189
Promoter: 29%
CpG-Island: 44%
Conserved: 63%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 0.00000011
Factore-val(match)DB
SP10.000000035664JASPAR
TFAP2A0.00048184JASPAR
RREB10.0018138JASPAR
Egr10.0031095JASPAR
Klf40.0065073JASPAR

BED file downloads

Download top of 189 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 61522680-61522830NFIA30.12
chr14: 24803205-24803355RP11-934B9.344.97
chr14: 24803205-24803355ADCY444.97
chr14: 24803205-24803355NOP944.97
chr4: 8202485-8202635SH3TC148.67
chr14: 53417220-53417370RP11-368P15.355.62
chr15: 75930980-75931130DNM1P3556.01
chr12: 106696965-106697115POLR3B59.29
chr12: 106696965-106697115TCP11L259.29
chr17: 15164580-15164730AC005703.360.62
View top connections.

Other

CodePlot