SOM cluster: 560

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 600
Promoter: 7%
CpG-Island: 0%
Conserved: 20%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.35
Factore-val(match)DB
MEF2A0.000099826JASPAR
Nkx2-50.00010209JASPAR
Sox50.00075566JASPAR
Pax40.0032575JASPAR
ARID3A0.0035609JASPAR

BED file downloads

Download top of 600 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 53310485-53310635IQSEC236.17
chrX: 53310485-53310635KDM5C36.17
chr1: 95193805-95193955LINC0105737.01
chr1: 95193805-95193955SLC44A337.01
chr1: 171786680-171786830METTL1343.72
chr11: 33744480-33744630FBXO344.33
chr11: 33744480-33744630C11orf9144.33
chr11: 33744480-33744630CD5944.33
chr5: 106954060-106954210EFNA546.56
chr1: 241682060-241682210OPN350.41
View top connections.

Other

CodePlot