SOM cluster: 56

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 199
Promoter: 6%
CpG-Island: 1%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 24/100 | e-val: 0.000000000000013
Factore-val(match)DB
Stat30.0000052645JASPAR
TEAD10.000023128JASPAR
NF-kappaB0.000052362JASPAR
RELA0.000057041JASPAR
REL0.00018821JASPAR
Sites: 23/100 | e-val: 0.0023
Factore-val(match)DB
Pax40.0000000027721JASPAR
SP10.000025505JASPAR
RREB10.00022002JASPAR
ZNF354C0.00062628JASPAR
T0.0019934JASPAR

BED file downloads

Download top of 199 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 125899720-125899870ALDH1L149.11
chr11: 20044340-20044490NAV251.98
chr11: 20044340-20044490NAV2-AS251.98
chr13: 61989280-61989430PCDH2052.13
chr1: 164572060-164572210RNU6-171P53.72
chr1: 164572060-164572210PBX153.72
chr1: 180892360-180892510XPR154.27
chr13: 39261040-39261190FREM260.64
chr8: 127461800-127461950RP11-103H7.263.74
chr6: 127839980-127840130SOGA366.59
View top connections.

Other

CodePlot