SOM cluster: 558

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 268
Promoter: 2%
CpG-Island: 1%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 74/100 | e-val: 0
Factore-val(match)DB
CTCF0.000000000000053846JASPAR
INSM10.0000012704JASPAR
SP10.0022153JASPAR
MYC::MAX0.0045259JASPAR
Zfp4230.0097569JASPAR

BED file downloads

Download top of 268 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 142255780-142255930TRBV11-129.66
chr7: 142038600-142038750TRBV6-133.5
chr9: 38727465-38727615RNU6-765P38.46
chr12: 107312640-107312790RIC8B46.66
chr12: 107312640-107312790CRY146.66
chr4: 88906820-88906970SPP148.19
chr4: 88906820-88906970HSP90AB3P48.19
chr12: 117135180-117135330RNFT248.46
chr22: 43343280-43343430PACSIN251.06
chr3: 65327860-65328010MAGI155.3
View top connections.

Other

CodePlot