SOM cluster: 553

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 185
Promoter: 24%
CpG-Island: 54%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.000000052861JASPAR
Pax40.00031067JASPAR
Klf40.0039339JASPAR
RREB10.0070771JASPAR
TFAP2A0.0084589JASPAR
Sites: 76/100 | e-val: 0.006
Factore-val(match)DB
SP10.00000016269JASPAR
INSM10.00075271JASPAR
CTCF0.0024532JASPAR
TFAP2A0.0095908JASPAR
Klf40.012856JASPAR

BED file downloads

Download top of 185 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 156611805-156611955HAPLN248.41
chr8: 26370460-26370610PNMA252.71
chr8: 26370460-26370610RP11-1G11.252.71
chr19: 55953425-55953575IL1157.11
chr12: 52281660-52281810ANKRD3358.73
chr11: 119455900-119456050PVRL158.74
chr2: 73519060-73519210ALMS162.92
chr2: 73519060-73519210PRADC162.92
chr2: 73519060-73519210EGR462.92
chr10: 91295665-91295815PANK164.25
View top connections.

Other

CodePlot