SOM cluster: 474

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 401
Promoter: 1%
CpG-Island: 0%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 67/100 | e-val: 1.2e-23
Factore-val(match)DB
CEBPA0.0000000072535JASPAR
HLF0.00061022JASPAR
NFIL30.0015551JASPAR
NFATC20.0024028JASPAR
Ddit3::Cebpa0.0093002JASPAR
Sites: 31/100 | e-val: 0.0000003
Factore-val(match)DB
CEBPA0.00000011138JASPAR
Pou5f10.00000066552JASPAR
Sox20.000001822JASPAR
HLF0.0000038484JASPAR
NFIL30.00033668JASPAR

BED file downloads

Download top of 401 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr18: 57057040-57057190CCBE140.09
chr9: 117614540-117614690TNFSF1542.86
chr16: 28545880-28546030NUPR144.55
chr1: 183213760-183213910LAMC248.36
chr1: 183213760-183213910RP11-548N1.148.36
chr6: 119441220-119441370FAM184A51.09
chr13: 32699600-32699750FRY53.14
chr7: 87936200-87936350AC003991.355.04
chr7: 87936200-87936350STEAP455.04
chr13: 50797020-50797170ST13P456.15
View top connections.

Other

CodePlot