SOM cluster: 464

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 166
Promoter: 6%
CpG-Island: 1%
Conserved: 31%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.000013
Factore-val(match)DB
AP10.0000000010817JASPAR
NFE2L20.00000010557JASPAR
NFE2L1::MafG0.00015983JASPAR
PBX10.011232JASPAR
PPARG0.038491JASPAR
Sites: 23/100 | e-val: 0.38
Factore-val(match)DB
IRF10.001874JASPAR
NFATC20.0020614JASPAR
NR1H2::RXRA0.0021247JASPAR
Foxd30.0022392JASPAR
FOXA10.0046744JASPAR

BED file downloads

Download top of 166 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 127392160-127392310RBM48P152.97
chr5: 118722760-118722910TNFAIP854.67
chr1: 230341680-230341830GALNT255.14
chr17: 40927900-40928050COA361.24
chr17: 40927900-40928050BECN161.24
chr3: 194282480-194282630ATP13A365.43
chr3: 194282480-194282630TMEM4465.43
chr3: 183167320-183167470SNORA6366.87
chr3: 183167320-183167470LINC0088866.87
chr3: 183167320-183167470KLHL6-AS166.87
View top connections.

Other

CodePlot