SOM cluster: 451

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 117
Promoter: 20%
CpG-Island: 65%
Conserved: 78%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 86/100 | e-val: 0
Factore-val(match)DB
SP10.000000013464JASPAR
TFAP2A0.0052843JASPAR
Klf40.04735JASPAR
PLAG10.051831JASPAR
Egr10.066608JASPAR
Sites: 92/100 | e-val: 1.8e-25
Factore-val(match)DB
SP10.00000016703JASPAR
PLAG10.00013359JASPAR
INSM10.0030593JASPAR
PPARG::RXRA0.0052951JASPAR
CTCF0.0097672JASPAR

BED file downloads

Download top of 117 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 64462420-64462570SLC22A1251.12
chr19: 38885205-38885355SPRED351.67
chr17: 29020900-29021050CRLF356.73
chr17: 29020900-29021050SMURF2P156.73
chr4: 40751840-40751990NSUN765.77
chr12: 7045920-7046070SCARNA1267.13
chr12: 7045920-7046070ENO267.13
chr12: 7045920-7046070EMG167.13
chr12: 7045920-7046070LEPREL267.13
chr12: 7045920-7046070ATN167.13
View top connections.

Other

CodePlot