SOM cluster: 447

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 100
Promoter: 18%
CpG-Island: 9%
Conserved: 68%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 3.7e-17
Factore-val(match)DB
SP10.000000011249JASPAR
Pax40.0000043291JASPAR
RREB10.0010228JASPAR
RXR::RAR_DR50.0019618JASPAR
PLAG10.0035772JASPAR
Sites: 38/100 | e-val: 0.0000000000056
Factore-val(match)DB
NFE2L20.00000000011557JASPAR
AP10.0000000057836JASPAR
PPARG0.0055156JASPAR
NFE2L1::MafG0.017635JASPAR
RORA_20.045882JASPAR

BED file downloads

Download top of 100 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 57089840-57089990APLNR45.65
chr11: 57089840-57089990TNKS1BP145.65
chr11: 57089840-57089990SSRP145.65
chr1: 204049620-204049770LINC0030346.2
chr1: 204049620-204049770ETNK246.2
chr8: 38592380-38592530Y_RNA52.17
chr6: 149067980-149068130UST61.19
chr9: 132096520-132096670RP11-65J3.163.75
chr19: 49071740-49071890NTN568.2
chr22: 43084540-43084690CYB5R369.02
View top connections.

Other

CodePlot