SOM cluster: 426

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 340
Promoter: 6%
CpG-Island: 0%
Conserved: 26%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 73/100 | e-val: 0
Factore-val(match)DB
SPI10.000000023692JASPAR
SPIB0.00000058182JASPAR
FEV0.000076572JASPAR
ELF50.00040937JASPAR
ELK40.0011617JASPAR

BED file downloads

Download top of 340 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 141660560-141660710MGAM27.54
chr7: 141660560-141660710CLEC5A27.54
chr1: 147790320-147790470RNU1-120P28.81
chr22: 37229200-37229350NCF445.78
chr20: 2665600-2665750SNORD5650.4
chr3: 138609680-138609830PIK3CB51.03
chr5: 57787140-57787290GAPT51.09
chr5: 57787140-57787290PLK251.09
chr11: 60048020-60048170MS4A4E52.98
chr10: 70804340-70804490KIAA127954.88
View top connections.

Other

CodePlot