SOM cluster: 42

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 74
Promoter: 19%
CpG-Island: 2%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/74 | e-val: 1.4e-18
Factore-val(match)DB
FEV0.0000000012492JASPAR
ELK40.000000015337JASPAR
SPI10.000000039372JASPAR
GABPA0.00000033652JASPAR
ELF50.000011751JASPAR
Sites: 12/74 | e-val: 1.6
Factore-val(match)DB
IRF10.000000052567JASPAR
IRF20.00000010535JASPAR
EWSR1-FLI10.0034915JASPAR
FEV0.0060792JASPAR
NFATC20.010584JASPAR
Sites: 25/74 | e-val: 0.00012
Factore-val(match)DB
SP10.000000028032JASPAR
Klf40.0000018547JASPAR
Pax40.0001683JASPAR
RREB10.0017597JASPAR
Tal1::Gata10.0067682JASPAR

BED file downloads

Download top of 74 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 37595160-37595310ERLIN252.73
chr6: 14877440-14877590RP11-146I2.157.54
chr8: 22103540-22103690PIWIL257.59
chr16: 88767460-88767610SNAI357.63
chr16: 88767460-88767610PIEZO157.63
chr22: 41613840-41613990RP4-756G23.560.65
chr8: 52874840-52874990PCMTD166.9
chr11: 4079460-4079610OR55B1P67.27
chr19: 50401100-50401250U368.39
chrX: 12968380-12968530TMSB4X69.18
View top connections.

Other

CodePlot