SOM cluster: 41

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 254
Promoter: 62%
CpG-Island: 83%
Conserved: 81%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
SP10.000020352JASPAR
TFAP2A0.00024017JASPAR
PLAG10.011005JASPAR
NHLH10.023324JASPAR
Klf40.030074JASPAR
Sites: 74/100 | e-val: 1.3e-37
Factore-val(match)DB
TFAP2A0.00066809JASPAR
CTCF0.002446JASPAR
SP10.0024837JASPAR
Egr10.0073419JASPAR
NHLH10.024075JASPAR
Sites: 67/100 | e-val: 1.8e-17
Factore-val(match)DB
PLAG10.0000037389JASPAR
SP10.0000087994JASPAR
TFAP2A0.000057849JASPAR
Klf40.010075JASPAR
Egr10.034968JASPAR

BED file downloads

Download top of 254 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 954940-955090SAMD1146.68
chr3: 169386980-169387130ACTRT349.49
chr9: 22008680-22008830C9orf5352.86
chr9: 22008680-22008830CDKN2B-AS152.86
chr5: 16936500-16936650MYO1056.27
chr4: 47838720-47838870CORIN57.51
chr1: 54955100-54955250RP4-705F19.158.01
chr8: 22446640-22446790BIN358.24
chr8: 22446640-22446790PPP3CC58.24
chr1: 856540-856690RP11-54O7.1158.54
View top connections.

Other

CodePlot