SOM cluster: 384

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 152
Promoter: 22%
CpG-Island: 9%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 2e-19
Factore-val(match)DB
CTCF0.000000000010908JASPAR
INSM10.0000038339JASPAR
PLAG10.000024234JASPAR
SP10.00083978JASPAR
Zfp4230.001606JASPAR
Sites: 10/100 | e-val: 0.0000000000000061
Factore-val(match)DB
Myf0.0000061034JASPAR
RXR::RAR_DR50.00018391JASPAR
REST0.00026725JASPAR
ZEB10.0016368JASPAR
NHLH10.0050047JASPAR
Sites: 29/100 | e-val: 0.000019
Factore-val(match)DB
SP10.000038416JASPAR
RREB10.00020483JASPAR
RXR::RAR_DR50.0005956JASPAR
Klf40.0046329JASPAR
MZF1_1-40.012377JASPAR
Sites: 14/100 | e-val: 0.00039
Factore-val(match)DB
NFKB10.00018692JASPAR
SPIB0.00020505JASPAR
NF-kappaB0.00025666JASPAR
SPI10.00026953JASPAR
REL0.00097794JASPAR
Sites: 6/100 | e-val: 0.3
Factore-val(match)DB
RREB10.0001111JASPAR
Stat30.0053357JASPAR
TEAD10.0079402JASPAR
MIZF0.010885JASPAR
Foxd30.012002JASPAR

BED file downloads

Download top of 152 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 169680760-169680910METTL1843.39
chr1: 169680760-169680910SELL43.39
chr1: 169680760-169680910C1orf11243.39
chr15: 85278160-85278310ZNF59258.86
chr15: 85278160-85278310WDR7358.86
chr15: 85278160-85278310SEC11A58.86
chr1: 117602040-117602190PTGFRN59.23
chr1: 117602040-117602190RPS15AP959.23
chr1: 117602040-117602190RP11-27K13.359.23
chr1: 117602040-117602190TTF259.23
View top connections.

Other

CodePlot