SOM cluster: 375

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 118
Promoter: 6%
CpG-Island: 2%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 2.3e-23
Factore-val(match)DB
AP10.00000000075117JASPAR
NFE2L20.0000000009327JASPAR
NFE2L1::MafG0.00017869JASPAR
Pax20.0051368JASPAR
PBX10.011482JASPAR
Sites: 45/100 | e-val: 3.1e-16
Factore-val(match)DB
Pax40.00000056916JASPAR
SP10.0000094854JASPAR
EWSR1-FLI10.000010945JASPAR
RREB10.000067739JASPAR
MZF1_1-40.0032918JASPAR

BED file downloads

Download top of 118 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 53342720-53342870RP6-29D12.445.04
chr12: 13247420-13247570KIAA146745.92
chr12: 13247420-13247570RP11-377D9.345.92
chrX: 67905660-67905810ACTR3P252.97
chrX: 67905660-67905810STARD852.97
chrX: 53292380-53292530IQSEC253.08
chr2: 185462440-185462590ZNF804A67.46
chr2: 10438000-10438150HPCAL172.15
chr14: 71350125-71350275PCNX76.96
chr14: 71350125-71350275RP6-65G23.376.96
View top connections.

Other

CodePlot