SOM cluster: 372

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 258
Promoter: 21%
CpG-Island: 7%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.0000036664JASPAR
EWSR1-FLI10.000008662JASPAR
Pax40.00001399JASPAR
RREB10.0003664JASPAR
INSM10.0004966JASPAR
Sites: 58/100 | e-val: 2.5e-20
Factore-val(match)DB
PLAG10.000053046JASPAR
SP10.00021642JASPAR
Tal1::Gata10.0068437JASPAR
RXR::RAR_DR50.018144JASPAR
INSM10.021243JASPAR
Sites: 24/100 | e-val: 0.00000048
Factore-val(match)DB
TP530.0030527JASPAR
SP10.003492JASPAR
Klf40.0042582JASPAR
REST0.012378JASPAR
Zfx0.021293JASPAR
Sites: 30/100 | e-val: 0.0012
Factore-val(match)DB
INSM10.00000089558JASPAR
TFAP2A0.0000042647JASPAR
EBF10.000010982JASPAR
REST0.0005106JASPAR
PLAG10.00062943JASPAR

BED file downloads

Download top of 258 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151129680-151129830SCNM113.44
chr1: 151129680-151129830SEMA6C13.44
chr1: 151129680-151129830PSMD413.44
chr1: 151129680-151129830TNFAIP8L213.44
chr1: 203256845-203256995RP11-134P9.334.69
chr1: 203256845-203256995NPM1P4034.69
chr1: 167597180-167597330MPZL139.39
chr1: 167597180-167597330RCSD139.39
chr1: 167597180-167597330RP3-455J7.439.39
chr3: 39190120-39190270GORASP141.43
View top connections.

Other

CodePlot