SOM cluster: 352

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 120
Promoter: 5%
CpG-Island: 5%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.45
Factore-val(match)DB
SP10.0000000000014373JASPAR
Pax40.0000012963JASPAR
MZF1_5-130.0000012976JASPAR
RREB10.00053408JASPAR
MZF1_1-40.00073407JASPAR

BED file downloads

Download top of 120 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 162500220-162500370UAP149.32
chr8: 129326120-129326270RN7SKP22655.62
chr5: 114885000-114885150TMED7-TICAM255.86
chr5: 114885000-114885150TMED755.86
chr5: 114885000-114885150TICAM255.86
chr1: 181455005-181455155CACNA1E58.31
chr11: 117688240-117688390FXYD263.16
chr11: 117688240-117688390RP11-728F11.463.16
chr11: 117688240-117688390FXYD6-FXYD263.16
chr1: 15710980-15711130RP3-467K16.266.62
View top connections.

Other

CodePlot