SOM cluster: 350

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 82
Promoter: 4%
CpG-Island: 2%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/82 | e-val: 4.8e-32
Factore-val(match)DB
AP10.00000015973JASPAR
NFE2L20.00000053275JASPAR
PPARG0.0030825JASPAR
NFE2L1::MafG0.0075434JASPAR
REST0.014486JASPAR
Sites: 25/82 | e-val: 0.000056
Factore-val(match)DB
RUNX10.00000019975JASPAR
RREB10.00010141JASPAR
ZNF354C0.0009149JASPAR
T0.016666JASPAR
Tcfcp2l10.017583JASPAR

BED file downloads

Download top of 82 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150895140-150895290CYCSP5113.02
chr7: 130873540-130873690LINC-PINT30.31
chr9: 109975920-109976070RP11-417L14.136.42
chr11: 35160580-35160730CD4440.51
chr11: 35160580-35160730RP1-68D18.240.51
chr9: 130150680-130150830GARNL342.25
chr2: 39719320-39719470AC007246.364.26
chr7: 44677800-44677950NPC1L165.67
chr17: 71287660-71287810SDK265.98
chr17: 71287660-71287810CPSF4L65.98
View top connections.

Other

CodePlot