SOM cluster: 347

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 129
Promoter: 17%
CpG-Island: 3%
Conserved: 86%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 26/100 | e-val: 0.0000053
Factore-val(match)DB
Pax40.0000000010217JASPAR
RREB10.000000063678JASPAR
SP10.00000012067JASPAR
EWSR1-FLI10.000053821JASPAR
Tal1::Gata10.00014975JASPAR
Sites: 30/100 | e-val: 0.000038
Factore-val(match)DB
CTCF0.000000000085441JASPAR
INSM10.0035702JASPAR
TAL1::TCF30.023152JASPAR
ZNF354C0.032295JASPAR
PPARG::RXRA0.033462JASPAR

BED file downloads

Download top of 129 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 147013000-147013150BCL913.02
chr1: 183287680-183287830RP11-548N1.142.28
chr1: 162666260-162666410HSD17B753.47
chr1: 162666260-162666410DDR253.47
chr1: 162666260-162666410RN7SL861P53.47
chr9: 97545400-97545550C9orf355.63
chr5: 121465140-121465290LOX67.16
chrX: 106045780-106045930TBC1D8B68.81
chr3: 171489140-171489290PLD170.59
chr3: 171489140-171489290PP1343970.59
View top connections.

Other

CodePlot